Gallery of Structures Solved in the CingolaniLab

Hepatitis B virus (HBV) nucleocapsid bound to Importins
PDB entries (Cryo-EM): 8G5V, 8G8Y, 8G6V, and 8GCN
Maps: EMD-29756, EMD-29858, and EMD-29785
Yang et al., Science Adv., 2024

Salmonella-phage P22 mature virion
PDB entries (Cryo-EM): 8TVU, 8TVR, 8U10, 8U11, and 8U1O,
Maps: EMD-41651, EMD-41649, EMD-41791, EMD-41792, and EMD-41819
Iglesias et al., J. Mol Biol., 2023

Pseudomonas-phage E217
PDB entries (Cryo-EM): 8FRS8FVH8FUV8FVG, and 8EON,
Maps: EMD-29406EMD-29487EMD-29481EMD-29486, and EMD-28405
Li et al., Nature Commun., 2023

Shigella-virus Sf6
PDB entries (Cryo-EM): 7SFS7SG77SPU7SP4, and 7UKJ
Maps: EMD-25101EMD-25106EMD-23372EMD-25365, and EMD-26582
Li et al., Science Adv., 2022


X-ray structure TDP-43 NLS bound to importin a1

TDP-43 NLS bound to importin α1
PDB entry (X-ray): 7N9H
Doll et al., Cell Rep., 2022

Cryo-EM reconstruction of Pseudomonas-phage E217 TerS

Pseudomonas-phage E217 TerS 
PDB entries (Cryo-EM): 8DKR and 7UXE
Map: EMD-26858
Lokareddy et al., J Mol Biol., 2022


Cryo-EM reconstruction of Pseudomonas-phage PaP3 Portal Protein

Pseudomonas-phage PaP3 Portal Protein 
PDB entries (Cryo-EM): 7SXK7SYA7SZ4 and 7SZ6
Maps: EMD- 25500255212556025562, and 25572
Chun-Feng David Hou et al., J Mol Biol., 2022

X-ray and SAXS structures of NF-kB p50/p65 bound to importin a3

NF-kB p65/p50-Imp a3 Complex 
PDB entries (X-ray/SAXS): 7LFC7LF47LEU7LEQ, and 7LET
Florio et al., Nature Commun, 2022


X-ray Structure of COX-1 bound to inhibitor

Synthetic COX-1 Inhibitor 
PDB entry (X-ray): 7JXT
Friedrich et al., Adv Sci., 2021

Cryo-EM reconstruction of T7 gp15-gp16 complex

Cryo-EM structure of the T7 DNA-Ejectosome
PDB entry (Cryo-EM): 7K5C. Map: EMD-22680
Swanson et al., Molecular Cell, 2021


X-ray structure of Fab4 bound to TerL (1-31)

Recombinant Fab4 bound to TerL (1-31)
PDB entries (X-ray): 6VI26VI16XMI
Lokareddy et al., Acta D, 2020

X-ray structure of Pseudomonas-phage PaP3

Pseudomonas-phage PaP3 TerS
PDB entry (X-ray/SAXS): 6W7T 
Niazi et al., Nucleic Acid Research, 2020


X-ray structure of Chlamydia SNARE-like protein IncA

Chlamydia SNARE-like Protein IncA
PDB entries (X-ray): 6E7E6E6A
Cingolani et al., Nature Commun., 2019

X-ray Structure of Mycobacterium DPP1

Mycobacterium Tuberculosis Heme Transporter DppA
PDB entries (X-ray): 6E3D6E4D
Mitra et al., Nature Commun., 2019


X-ray and SAXS structures of S. cerevisiae Inositol Phosphatase Siw14

Saccharomyces cerevisiae Inositol Phosphatase Siw14
PDB entry (X-ray/SAXS): 6E3B
Florio et al., Biochemistry, 2019

X-ray and SAXS structure of human and yeast RCC1 bound to importin a1/Kap60

RCC1 bound to importin a3 and Kap60
PDB entries (X-ray/SAXS): 5TBK5T94
Sankhala et al., Nature Commun., 2017


X-ray structure of COX-1 bound to Mofezolac

Inhibition of COX-1 by Mofezolac and P6
PDB entries (X-ray): 5WBE5U6X
Cingolani et al., Eur. J. Med. Chem., 2017

X-ray structure of P22 ProCapsid Portal Protein

Immature ProCapsid Portal Protein
PDB entries (X-ray): 5JJ35JJ1
Lokareddy et al., Nature Commun., 2017


Pom121 NLS bound to importin α

Pom121 NLS bound to importin α
PDB entry (X-ray): 4YI0
Kralt et al., Mol. Cell. Bio., 2015

Shigella-Sf6-TailNeedles

HK620 and P22 Tail Needles at different pHs
PDB entries (X-ray): 4ZKP4ZKU4ZXQ5BU55BVZ5BU8
Bhardwaj et al., J. Biol. Chemistry, 2016


Yeast-Importin-a1-Heh2-sNLS

Heh1 and Heh2 membrane protein NLSs
PDB entries (X-ray): 4PVZ4XZR
Lokareddy et al., Structure, 2015

Mycobacterium tubercolosis TNT-IFT

Mycobacterium Tuberculosis TNT-IFT complex
PDB entry (X-ray): 4QLP
Sun et al., Nature Struct. Mol. Biol., 2015


Importin α1, 3, 7 bound to Influenza

Importin α1, 3, 7 bound to Influenza PB2
PDB entries (X-ray): 4UAD4UAE4UAF
Pumroy et al., Structure, 2015

Phosphatase domain of Human Laforin

Phosphatase domain of Human Laforin
PDB entry (X-ray): 4R30
Sankhala et al., J. Biol. Chemistry, 2015


Human RNA Phosphatase PIR1

Human RNA Phosphatase PIR1
PDB entries (X-ray): 4MBB4NYH
Sankhala et al., Biochemistry, 2014

Human p53-phosphatase DUSP26

Human p53-phosphatase DUSP26
PDB entry (X-ray): 4HRF
Lokareddy et al., Biochemistry, 2013


P22 Headful Packaging Nuclease

P22 Headful Packaging Nuclease
PDB entry (X-ray): 4DKW
Roy et al., J. Biol. Chemistry, 2012

Human-Importin-a5-Nup50

Human Importin α5 bound to Nup50
PDB entry (X-ray): 3TJ3
Ruth et al., J. Biol. Chemistry, 2012


P22 nonameric Small terminase subunit

P22 nonameric Small terminase subunit
PDB entry (X-ray): 3P9A
Roy et al., Structure, 2012

Importin α1 bound to PLSCR4 minimal NLS

Importin α1 bound to PLSCR4 minimal NLS
PDB entry (X-ray): 3Q5U
Lott et al., J. Biol. Chemistry, 2011


Structure of phage Sf6 Tail Needle Knob

Structure of phage Sf6 Tail Needle Knob
PDB entries (X-ray): 3RWN4K6B
Bhardwaj et al., J. Biol. Chemistry, 2011

E.coli F1 ATPase inhibited by subunit ε

E.coli F1 ATPase inhibited by subunit ε
PDB entry (X-ray): 3OAA
Cingolani and Duncan, Nature Struct. Mol. Biol.2011


Full length dodecameric P22 Portal Protein PDB entry: 3LJ5 Olia

Full-length dodecameric P22 Portal Protein
PDB entry (X-ray): 3LJ5
Olia et al., Nature Struct. Mol. Biol., 2011

P22 Portal Protein Core bound to twelve GP4s PDB entries: 1VT0,

P22 Portal Protein Core bound to twelve GP4s
PDB entries (X-ray): 1VT03LJ4
Olia et al., Nature Struct. Mol. Biol., 2011


Human-Importin-Beta Open and Close conformation

Open and closed Importin β bound to sIBB
PDB entry (X-ray): 3LWW
Bhardwaj et al., Biochemistry, 2010

Barnase-permutant

A circular permutant of Barnase
PDB entry (X-ray): 3DA7
Butler et al., Biochemistry, 2009


VacciniaVirus-VH1-phosphatase

Vaccinia Virus Dual Specificity Phosphatase
PDB entries (X-ray/SAXS): 3CM32RF6
Koksal et al., J. Biol. Chemistry, 2009

Phage P22 Tail Needle Gp26

Phage P22 Tail Needle Gp26
PDB entries (X-ray): 2POH3C9I
Olia et al., Nature Struct. Mol. Biol., 2007


Importin β bound to snurportin IBB-domain
PDB entries (X-ray): 2P8Q2Q5D
Mitrousis et al., J. Biol. Chemistry, 2008

Mammalian Importin α bound to PLSCR1 NLS

Mammalian Importin α bound to PLSCR1 NLS
PDB entry (X-ray): 1Y2A
Chen et al., J. Biol. Chemistry, 2005


Human Importin Beta bound to PTHrP

Importin β HEATs (1-11) bound to the PTHrP
PDB entry (X-ray): 1M5N
Cingolani et al., Molecular Cell, 2002

Human-Importin-Beta_IBB

Human Importin β bound to the IBB-domain
PDB entries (X-ray): 1QGK1QGR
Cingolani et al., Nature, 1999